The IMAGE section regularly publishes project opportunities for BSc and MSc students.

The board below shows the current projects. This board is a read-only showcase: if you are interested in a project, contact the supervisor directly by e-mail.

FAQ

Is conditioning possible for a trained diffusion model / flow matching?

Is conditioning possible for a trained diffusion model / flow matching?

open Bachelor ThesisMaster ProjectMaster Thesis Generative models

Explore current methods in low dimensional spaces, where analytical answers are known.

Supervisor: Julius Kirkegaard (juki@di.ku.dk)

Amortized Global Fitting

Amortized Global Fitting

open Bachelor ThesisMaster ProjectMaster Thesis

Speed up Amylofit.

Supervisor: Julius Kirkegaard (juki@di.ku.dk)

Generalize deeptangle

Generalize deeptangle

open Bachelor ThesisMaster ProjectMaster Thesis

See github.com/kirkegaardlab/deeptangle. Different types of projects on both research and software side of things.

Supervisor: Julius Kirkegaard (juki@di.ku.dk)

Synthetic data of algal flagella beating.

Synthetic data of algal flagella beating.

open Bachelor ThesisMaster ProjectMaster Thesis

Supervisor: Julius Kirkegaard (juki@di.ku.dk)

Gaussian splatting for microscopy (supervised jointly with Bernhard Kerbl)

Gaussian splatting for microscopy (supervised jointly with Bernhard Kerbl)

open Master Thesis MicroscopyComputer graphics

“Computational confocal microscopy” with Gaussian splats.

Supervisor: Julius Kirkegaard (juki@di.ku.dk)

Mask-free training of masked diffusion

Mask-free training of masked diffusion

open Master ThesisMaster Project

Please find me in my office (3-2-11) if this title captures your attention. Happy to explain in person.

Supervisor: Julius Kirkegaard (juki@di.ku.dk)

Improving skeletonization algorithms for pixel-thin segmentations

Improving skeletonization algorithms for pixel-thin segmentations

open Bachelor ThesisMaster ProjectMaster Thesis Image segmentation

Supervisor: Julius Kirkegaard (juki@di.ku.dk)

Eye-tracking in radiology

Eye-tracking in radiology

open Eye tracking

This project uses eye tracking to understand how people read images.

Supervisor: Bulat Ibragimov (bulat@di.ku.dk)

Dental image analysis

Dental image analysis

open Medical image analysis

This project focuses on the use of AI in dental image analysis and treatment planning.

Supervisor: Bulat Ibragimov (bulat@di.ku.dk)

ElectroEncephalography Simulations done right: simulate neural evoked responses for statistical modelling

open Bachelor ThesisMaster ProjectMaster Thesis Brain imagingSimulation

Develop scripts to automatically generate known brain events using state of the art tools in ElectroEncephalography (EEG) simulations.

Supervisor: Cyril Pernet (cyril.pernet@nru.dk)

Learning to reconstruct Brain Data for QC

open Master ProjectMaster Thesis Brain imagingMachine learning

Use data science and machine learning to build an autoencoder that detects outliers in brain data (MRI, PET, EEG) and apply it to real data.

Supervisor: Cyril Pernet (cyril.pernet@nru.dk)

Predicting response to treatment in depression - a brain imaging approach

open Master ProjectMaster Thesis Brain imagingMachine learning

Apply your ML skills to brain imaging data!

Supervisor: Cyril Pernet (cyril.pernet@nru.dk)

Developing normative models of brain neurotransmitters.

Developing normative models of brain neurotransmitters.

open Master ProjectMaster ThesisBachelor Thesis Brain imaging

Apply state of the art normative tools to positron emission tomography data in health and depression.

Supervisor: Cyril Pernet (cyril.pernet@nru.dk)

Reinforcement learning in machines and humans

open Master ProjectMaster Thesis Reinforcement learning

Test and validate a reinforcement learning paradigm and the computational model of human behaviour.

Supervisor: Cyril Pernet (cyril.pernet@nru.dk)

Simulation for Robots

Simulation for Robots

open Bachelor ThesisMaster ProjectMaster Thesis RoboticsSimulation

Think of simulation as a robot's rehearsal space: practice thousands of times virtually, predicting outcomes and perfecting movements, to develop and validate control algorithms safely.

Supervisor: Hang Yin (hayi@di.ku.dk)

Medical Robotics: Simulation & Mapping

Medical Robotics: Simulation & Mapping

open Master ThesisMaster Project Medical roboticsSimulation

Develop ultra-realistic simulation environments for colonoscopy training, using digital twins of the colon and 3D Gaussian splatting so robots and clinicians can practice safely.

Supervisor: Hang Yin (hayi@di.ku.dk)

Flying Drones as a Team

Flying Drones as a Team

open Bachelor ThesisMaster ProjectMaster Thesis Robotics

Program a team of drones to move in a coordinated way, implementing barrier-function or consensus-based control so they fly without colliding.

Supervisor: Hang Yin (hayi@di.ku.dk)

Teach Robots to Understand You: Building Language-Controlled Robot Arms

Teach Robots to Understand You: Building Language-Controlled Robot Arms

open Master ProjectMaster Thesis RoboticsNatural language processing

Build a complete system where a robot arm responds to natural language commands, combining language and vision models with real manipulation tasks.

Supervisor: Hang Yin (hayi@di.ku.dk)

Robots in the Lab: Automating Science So Scientists Can Focus on Discovery

Robots in the Lab: Automating Science So Scientists Can Focus on Discovery

open Bachelor ThesisMaster ProjectMaster Thesis Robotics

Put robot arms to work in real scientific workflows: automate sample scanning and handling so scientists can focus on discovery.

Supervisor: Hang Yin (hayi@di.ku.dk)

Processing of larger than memory images

Processing of larger than memory images

open Bachelor ThesisMaster ProjectMaster Thesis MicroscopyImage processing

Recent microscope and synchrotron images can be extremely large. Explore methods and a FSharp library for processing images larger than memory.

Supervisor: Jon Sporring (sporring@di.ku.dk)

Segment and analyse Human Organ Atlas data

Segment and analyse Human Organ Atlas data

open Bachelor ThesisMaster ProjectMaster Thesis Image segmentationMedical imaging

Work further with segmenting scans from the Human Organ Atlas, an exceptional collection of full human organ scans at micrometer resolution.

Supervisor: Jon Sporring (sporring@di.ku.dk)

Scaling laws in human organs

Scaling laws in human organs

open Bachelor ThesisMaster ProjectMaster Thesis Medical imagingGeometry

Identify and measure scaling laws in Human Organ Atlas data; scaling laws describe how biological properties change with size or volume.

Supervisor: Jon Sporring (sporring@di.ku.dk)

Reconstruction of the coronary artery tree

Reconstruction of the coronary artery tree

open Bachelor ThesisMaster ProjectMaster Thesis Medical imagingImage segmentation

Reconstruct the coronary artery tree from 2-dimensional angiogram movies, continuing previous work on simulation and vessel segmentation.

Supervisor: Jon Sporring (sporring@di.ku.dk)

Automate generation of 3D-printed neck support for radiotherapy treatments.

Automate generation of 3D-printed neck support for radiotherapy treatments.

open RadiotherapyMedical imaging

In this project, we will use the planning scan to design a 3D-printed, patient-specific neck support that extends to include the shoulders.

Supervisor: Jens Petersen (phup@di.ku.dk)

Investigate Refusal Behavior of LLMs in Medical Tasks

open Master ThesisMaster Project Natural language processing

Explore refusal behavior of LLMs in medical contexts: are refusals distributed equally across patient subgroups, and how does prompting in low-resource languages like Danish affect refusal?

Supervisor: Alissa Valentine (alissa.valentine@di.ku.dk)

Develop Lexicon for Multilingual Biased Language Detection

open Master ThesisMaster Project Natural language processing

Existing lexicons for biased language in medicine are English-only. This project explores methods to translate lexicons of harmful words to other languages.

Supervisor: Alissa Valentine (alissa.valentine@di.ku.dk)