Publications
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2026
For Those Who Believe in Faithfulness: Optimizing the Area Under Insertion and Deletion Curves for Ranking Relative Feature Importance
arXiv preprint arXiv:2610.09844
Predicting Radiologist Expertise from 3D Gaze Patterns During CT Interpretation
International Conference on Medical Image Computing and Computer-Assisted …
MedPruner: Training-Free Hierarchical Token Pruning for Efficient 3D Medical Image Understanding in Vision-Language Models
International Conference on Medical Image Computing and Computer-Assisted …
Deep Learning‐Based Automated Bowel Wall Thickness Measurement in Intestinal Ultrasound for Inflammatory Bowel Disease
JCC Plus
Clinical Outcome of Non‐Surgical Endodontic Treatment Performed by Undergraduate Dental Students: A Retrospective Observational Cohort Study
International Endodontic Journal
Political Bias in Decentralized Prediction Markets: Evidence from Trump-Related Contracts on Polymarket
Available at SSRN
Explanation-Guided Reconstruction of Missing Clinical Features for Survival Prediction in Pancreatic Cancer
IEEE Journal of Biomedical and Health Informatics
Revisiting multi-nodal radiomics with advanced feature learning for lymphoma classification: a multi-center study
Physics in Medicine & Biology
Improved pancreatic imaging with photon-counting CT: a retrospective comparison with conventional CT
Acta Radiologica
Phase segmentation of a percutaneous medical procedure
US Patent
Reduced beam hardening in urogenital imaging with photon-counting CT: a retrospective direct comparison with conventional CT
Acta Radiologica
The Impact of Training Dental Students to Use an Artificial Intelligence–Based Platform for Pulp Exposure Prediction Prior to Deep Caries Excavation: A Proof‐of‐Concept …
International Endodontic Journal
GPU Memory and Utilization Estimation for Training-Aware Resource Management: Opportunities and Limitations
Proceedings of the Sixth European Workshop on Machine Learning and Systems …
Visual search patterns in 3D pancreatic imaging: an eye tracking study
Medical Imaging 2026: Image Perception, Observer Performance, and Technology …
Dosimetric assessment of deep learning based organ-at-risk segmentation: insights from the HaN-Seg challenge
Radiotherapy and Oncology
Prediction of pulpal sequelae in cracked teeth with reversible pulpitis using machine learning models
Journal of Endodontics
ARCGym: Benchmarking Deep Reinforcement Learning in Autonomous Robotic Colonoscopy
IEEE Robotics and Automation Letters
Alternating Spatial‐Temporal Optimization for Continuous Collision Detection of Signed Distance Fields
Computer Graphics Forum
MERA: Multimodal and Multiscale self-Explanatory model with considerably reduced annotation for lung nodule diagnosis
Biomedical Signal Processing and Control
Clinically validated dataset of 435 human colons segmented from CT colonography
Scientific Data
Nationwide AI Models for Depression Prediction: Regional Generalizability and Culturally Sensitive Variable Selection
Proceedings of the AAAI/ACM Conference on AI, Ethics, and Society 9 (4 …
Is invariance all you need for algorithmic fairness? Removing demographic information can create new bias
arXiv preprint arXiv:2609.32004
A clinical brain MRI dataset of polymicrogyria in patients suspected of epilepsy
Machine Learning for Biomedical Imaging 2026 (Special Issue on MICCAI Open …
Building an open infrastructure for molecular neuroimaging: Standards and tools from the OpenNeuroPET initiative
Journal of Cerebral Blood Flow & Metabolism, 0271678X261490245
Prevalence of malformations of cortical development in patients with suspected epilepsy based on a clinical MRI dataset
medRxiv, 2026.08. 19.26360591
Preoperative limbic cortical thinning in mesial temporal lobe epilepsy surgical candidates is associated with pre‐existing and de novo postoperative depression
Epileptic Disorders
Neuroanatomical dimensions in recent-onset depression: clinical profiles, inflammatory markers, and proteomic ageing
medRxiv, 2026.06. 01.26354320
MOSAIC: A Multilingual, Taxonomy-Agnostic, and Computationally Efficient Approach for Radiological Report Classification in Low-Resource Settings
Proceedings of the 8th Workshop on Clinical Natural Language Processing …
A dataset of clinical pediatric brain MRI with and without motion correction
Scientific Data
Neurophysiological correlates of neuroanatomical dimensions in major depressive disorder: EEG markers of brain function and treatment outcome
Biological Psychiatry Global Open Science
Regional Inequities and Cultural Sensitivity in AI Models for Psychiatric Care
OSF
Brain MRI Dataset Featuring a Full Clinical Protocol With and Without Intentional Motion
Scientific Data
Psilocybin acutely reduces low-frequency BOLD power and frequency-specific connectivity
bioRxiv, 2026.04. 09.717379
Age-dependent acceleration of structural brain aging in medication-free major depressive disorder linked to neuroanatomical phenotype findings from COORDINATE-MDD consortium
MedRxiv
Independent evaluation of deep learning models for detecting focal cortical dysplasia
Epilepsy Research
Inter-individual variability of neurotransmitter receptor and transporter density in the human brain
Brain Structure and Function
Associations of serotonin-related brain morphology in early adolescence with behavioral and emotional problems: a population-based neuroimaging study
Neuroscience Applied
Prediction of brain age using structural magnetic resonance imaging: a comparison of clinical utility of publicly available software packages
EBIOMEDICINE
Direction-Scale Decomposition in Action Representation: Rethinking What to Tokenize for Vision-Language-Action Models
arXiv preprint arXiv:2609.28865
CMP: Robust Whole-Body Tracking for Loco-Manipulation via Competence Manifold Projection
arXiv preprint arXiv:2604.07457
Learning Multi-Robot Coordination with Invariant Consensus Stabilization
Proceedings of Machine Learning Research vol
Discrete Inverse Rendering: Biological Image Analysis with Integer Programming
Discrete Inverse Rendering: Biological Data Analysis with Integer Programming
bioRxiv, 2026.07. 23.740284
A modular framework for automated segmentation and analysis of AFM imaging of chromatin organization
Nucleic Acids Research 54 (12), gkag632
Differentiable Vertex Model: Exploring Gradient-Based Optimization for Tissue Morphogenesis
bioRxiv, 2026.05. 07.723189
Radiation-induced peroxide rupture and its temperature-dependent repair probed by homogeneous X-ray irradiation
Biological Crystallography
Reply to van Haastert: Local competition between Ras/actin-driven protrusions
Proceedings of the National Academy of Sciences
189. Precision Functional Mapping in Obsessive-Compulsive Disorder
Biological Psychiatry 99 (10), S179-S180
Quality assessment and control of unprocessed anatomical, functional and diffusion MRI of the human brain using MRIQC
Nature Protocols
[11C]PS13 PET shows that age is positively correlated with constitutively expressed cyclooxygenase-1 in the brain
Journal of Cerebral Blood Flow & Metabolism, 0271678X261444895
NiQuery: Stop searching your neuroimaging datasets. Start testing your hypotheses
OSF
Molecular connectivity studies of cerebral glucose metabolism and blood flow: a scoping review
Neuroscience & Biobehavioral Reviews
nipy/nipype: 1.11. 0 (Version 1.11. 0)[Computer software]
Zenodo
EXPRESS: Building an open infrastructure for molecular neuroimaging: standards and tools from the OpenNeuroPET initiative
Journal of Cerebral Blood Flow & Metabolism, 0271678X261490245
2025
rNCA: Self-Repairing Segmentation Masks
arXiv preprint arXiv:2512.13397
Endoscopic anatomical feature tracking
US Patent App. 19/304
Alignment techniques for percutaneous access
US Patent
Extremal Contours: Gradient-driven contours for compact visual attribution
arXiv preprint arXiv:2511.01411
PiMPiC: An Overlap-Aware Contrastive Learning Framework for 3D Patch-Based Medical Image Segmentation
MICCAI Workshop on Data Engineering in Medical Imaging
Longitudinal Anatomical Attention Maps for Recognizing Diagnostic Errors from Radiologists’ Eye Movements
International Conference on Medical Image Computing and Computer-Assisted …
CARMA: Collocation-Aware Resource Manager
arXiv preprint arXiv:2508.19073
CARMA: Collocation-Aware Resource Manager with GPU Memory Estimator
arXiv e-prints, arXiv: 2508.19073
The value of artificial intelligence in PSMA PET: a pathway to improved efficiency and results.
The Quarterly Journal of Nuclear Medicine and Molecular Imaging: Official …
Uncertainty Estimation in Cardio Landmark Detection and Heart Disease Diagnosis on Chest X-Ray Images
IEEE Access
The relationship between eye tracking features and transfer learning in modeling decision prediction of radiologists reading mammograms
Medical Imaging 2025: Image Perception, Observer Performance, and Technology …
Dentassignnet: Assignment network for dental cast labeling in the presence of dental abnormalities
IEEE journal of biomedical and health informatics
Prediction of Radiological Diagnostic Errors from Eye Tracking Data Using Graph Neural Networks and Gaze-Guided Transformers
Graphs in Biomedical Image Analysis: 6th International Workshop, GRAIL 2024 …
Improving the Real-time Classification of Disease Severity in Ulcerative Colitis: Artificial Intelligence as the Trigger for a Second Opinion
Official journal of the American College of Gastroenterology| ACG, 10.14309
Prediction of radiological decision errors from longitudinal analysis of gaze and image features
Artificial intelligence in medicine
Gaze assistance for efficient segmentation correction of medical images
IEEE Access
NEMt: Fast targeted explanations for medical image models via neural explanation masks
Northern Lights Deep Learning Conference
Short-term Outcome of Non-surgical Endodontic Treatments Performed by Pre-graduate Students Over 13 Years: a Retrospective Study at the University of Copenhagen
22nd Biennial Congress of the European Society of Endodontology (ESE …
Neural Kinematic Bases for Fluids
Proceedings of the SIGGRAPH Asia 2025 Conference Papers
Policy-space interpolation for physics-based characters
Proceedings of the ACM on Computer Graphics and Interactive Techniques 8 (4 …
Collision constraints and diffeomorphisms: dealing with physics in deformable image registration
IEEE Access
Policy-space diffusion for physics-based character animation
ACM Transactions on Graphics
HQColon: A Hybrid Interactive Machine Learning Pipeline for High Quality Colon Labeling and Segmentation
arXiv preprint arXiv:2502.21183
SE(3) group convolutional neural networks and a study on group convolutions and equivariance for DWI segmentation
Frontiers in Artificial Intelligence
Machine Learning for Longitudinal Brain-Age Prediction
medRxiv, 2025.12. 10.25341964
Agreement of image quality metrics with radiological evaluation in the presence of motion artifacts
Magnetic Resonance Materials in Physics, Biology and Medicine
Neuroanatomical dimensions in major depression linked to cognition, adverse life events, self-harm, metabolomics and genetics
Communications medicine
Generating Realistic Synthetic Motion Curves for MRI Retrospective Motion Correction
Reconstruction and Imaging Motion Estimation, and Graphs in Biomedical Image …
In the picture: Medical imaging datasets, artifacts, and their living review
Proceedings of the 2025 ACM conference on fairness, accountability, and …
Measuring and interpreting individual differences in fetal, infant, and toddler neurodevelopment
Developmental Cognitive Neuroscience
128. Predicting Antidepressant Treatment Outcome in Major Depressive Disorder Using Multi-Domain Data: A Neuropharm Study
Biological Psychiatry 97 (9), S148
A sensitivity analysis of preprocessing pipelines: Toward a solution for multiverse analyses
Imaging Neuroscience 3, imag_a_00523
Neuroanatomical dimensions in major depression: external validation and links with cognition, adverse life events, self-harm, metabolomics and genetics
Building multivariate molecular imaging brain atlases using the NeuroMark PET independent component analysis framework
bioRxiv
Assessing the influence of preprocessing on the agreement of image quality metrics with radiological evaluation in the presence of motion
Proceedings of the Annual Meeting of ISMRM
Associations of serotonin-related brain morphology in early adolescence with behavioral and emotional problems
NeuroImage: Clinical
An exploration of interpretable deep learning models for the assessment of mild cognitive impairment
Proc. Interspeech
Changes in hippocampal volume, 5-HT4 receptor binding, and verbal memory over the course of antidepressant treatment in major depressive disorder
Journal of psychiatric research
Evaluation of a volume and intensity-based FLAIR algorithm developed to assist in DWI-FLAIR mismatch assessment in wake-up stroke
European Journal of Radiology Artificial Intelligence
Toward a full-scale model of renal hemodynamics using a reconstructed vascular tree
American Journal of Physiology-Renal Physiology 328 (5), F702-F723
Clinicians’ agreement on extrapulmonary radiographic findings in chest X-rays using a diagnostic labelling scheme
Diagnostics
AI-guided delineation of gross tumor volume for body tumors: A systematic review
Diagnostics
MIPLS2: Exploiting PLS2 to impute missing values in a two-block system with multiple response variables
Analytica Chimica Acta
Transforming hyperspectral images into chemical maps: a novel End‐to‐End Deep Learning approach
Journal of Chemometrics
Integrating deep learning derived morphological traits and molecular data for total-evidence phylogenetics: lessons from digitized collections
Systematic Biology
A Time Series Dataset of NIR Spectra and RGB and NIR-HSI Images of the Barley Germination Process
arXiv preprint arXiv:2504.16658
Transforming Hyperspectral Images Into Chemical Maps: An End-to-End Deep Learning Approach.
CoRR
The Phantom of the Elytra--Phylogenetic Trait Extraction from Images of Rove Beetles Using Deep Learning--Is the Mask Enough?
arXiv preprint arXiv:2502.04541
Towards Safe Reinforcement Learning with Reduced Conservativeness: A Case Study on Drone Flight Control
2025 IEEE/RSJ International Conference on Intelligent Robots and Systems …
Real-time iteration scheme for diffusion policy
2025 IEEE/RSJ International Conference on Intelligent Robots and Systems …
GC-VLN: Instruction as graph constraints for training-free vision-and-language navigation
arXiv preprint arXiv:2509.10454
Unfolding the literature: A review of robotic cloth manipulation
Annual Review of Control, Robotics, and Autonomous Systems
The First WARA Robotics Mobile Manipulation Challenge-Lessons Learned
2025 European Conference on Mobile Robots (ECMR)
Beyond predefined actions: Integrating behavior trees and dynamic movement primitives for robot learning from demonstration
arXiv preprint arXiv:2505.08625
Learning Interpretable Robot Policies from Demonstration
Ph. D. dissertation, Örebro University
Spline refinement with differentiable rendering
International Conference on Medical Image Computing and Computer-Assisted …
Adaptive node positioning in biological transport networks
Physical Review Letters
Modeling full-scale leaf venation networks
PLOS Computational Biology
Detection limitations of bacteria in tissue samples
Bone & joint research
Persistent pseudopod splitting is an effective chemotaxis strategy in shallow gradients
Proceedings of the National Academy of Sciences
Local clustering and global spreading of receptors for optimal spatial gradient sensing
Physical Review Letters
Positron Emission Tomography Quantification in Healthy Humans of Cyclooxygenase-2 (COX-2), a Potential Biomarker of Neuroinflammation
Journal of Nuclear Medicine 66 (supplement 1)
[11C] PS13 PET shows that age is positively correlated with constitutively expressed cyclooxygenase-1 in the brain
Journal of Nuclear Medicine 66 (supplement 1)
Frontostriatal salience network expands as executive networks contract in Obsessive-Compulsive Disorder
bioRxiv
355. PET2BIDS: the Key to PET Neuroimaging Data Standardization, Collaboration, and AI Integration
Biological Psychiatry 97 (9), S242-S243
Molecular connectivity studies in neurotransmission: a scoping review
Imaging Neuroscience 3, imag_a_00530
Can I have your data? Recommendations and practical tips for sharing neuroimaging data upon a direct personal request
Imaging Neuroscience 3, imag_a_00508
PET quantification in healthy humans of cyclooxygenase-2, a potential biomarker of neuroinflammation
Journal of Nuclear Medicine
GHAZANFARI N. 1, LIOW JS 1, KIM MJ 1, 2, CURETON R. 1, LEE A. 1
JOURNAL OF NUCLEAR MEDICINE
[11C]PS13 Demonstrates Pharmacologically Selective and Substantial Binding to Cyclooxygenase-1 in the Human Brain
Journal of Nuclear Medicine
Transforming Hyperspectral Images Into Chemical Maps: A Novel End‐to‐End Deep Learning Approach.
Journal of Chemometrics 39 (8), 1
Collision Constraints & Diffeomorphisms: Dealing with Physics in Deformable Image Registration
IEEE Access
In-depth 3D Exploration of Autosomal Dominant Polycystic Kidney Disease Through Light Sheet Fluorescence Microscopy
bioRxiv.03. 18.644002
The value of artificial intelligence in PSMA PET: a pathway to improved efficiency and results
The quarterly journal of nuclear medicine and molecular imaging: official …
Prediction of brain age using structural magnetic resonance imaging: A comparison of clinical validity of publicly available software packages
medRxiv.03. 13.25323902
Transforming Hyperspectral Images Into Chemical Maps: An End-to-End Deep Learning Approach
arXiv preprint arXiv:2504.14131
2024
Automatic calculation of cardiometric coefficients on chest X-ray images
IEEE Access
Imaging the pancreas with photon-counting CT–A review of normal pancreatic anatomy
European Journal of Radiology
Artificial neural networks as a natural tool in solution of variational problems in hydrodynamics
IEEE Access
Centerline-guided reinforcement learning model for pancreatic duct identifications
Journal of Medical Imaging
Building an AI support tool for real-time ulcerative colitis diagnosis
KI-Künstliche Intelligenz
Gaze-assisted medical image segmentation
arXiv preprint arXiv:2410.17920
Approaching in vivo blood count tests with capillaroscopy and deep learning
TechRxiv
Reinforcement learning‐based anatomical maps for pancreas subregion and duct segmentation
Medical physics
Generating synthetic computed tomography for radiotherapy: SynthRAD2023 challenge report
Medical image analysis
HaN-Seg: the head and neck organ-at-risk CT and MR segmentation challenge
Radiotherapy and Oncology
Learn Together Stop Apart: An Inclusive Approach to Ensemble Pruning
Proceedings of the 30th ACM SIGKDD Conference on Knowledge Discovery and …
AI-initiated second opinions: a framework for advanced caries treatment planning
BMC Oral Health
Finding NEM-U: Explaining unsupervised representation learning through neural network generated explanation masks
Forty-first International Conference on Machine Learning
Deep implicit statistical shape models for 3D lumbar vertebrae image delineation
Medical Imaging 2024: Image Processing
Recognition of radiological decision errors from eye movement during chest X-ray readings
Medical Imaging 2024: Image Perception, Observer Performance, and Technology …
vOARiability: Interobserver and intermodality variability analysis in OAR contouring from head and neck CT and MR images
Medical physics
The use of machine learning in eye tracking studies in medical imaging: A review
IEEE journal of biomedical and health informatics
ADAPT: AI‐Driven Artefact Purging Technique for IMU Based Motion Capture
Computer Graphics Forum
Differentiable Rendering as a Way to Program Cable-Driven Soft Robots
arXiv preprint arXiv:2404.07590
A systematic comparison between FEBio and PolyFEM for biomechanical systems
Computer methods and programs in biomedicine
Multimodal brain age prediction using machine learning: combining structural MRI and 5-HT2AR PET-derived features
Geroscience
Classification of radiological text in small and imbalanced datasets in a non-english language
arXiv preprint arXiv:2409.20147
NeuroImaging of Babies during natural Sleep to assess typical development and Cerebral Palsy (NIBS-CP)
Fetal, Infant, & Toddler Neuroimaging Group Annual Conference
Simulating Head Motion in MRI: A Silicone Phantom Approach with Machine Learning Integration
ISMRM Workshop on Motion Correction in MR
Head Movement in the Resting-State Functional Magnetic Resonance Imaging (rs-fMRI) Data of the Adolescent Brain Cognitive Development (ABCD) Study
ISMRM Workshop on Motion Correction in MR
Generative Models for Children’s Head Motion in Resting-State Functional Magnetic Resonance Imaging (rs-fMRI)
ISMRM Workshop on Motion Correction in MR
Publisher Correction: Neuroanatomical dimensions in medication-free individuals with major depressive disorder and treatment response to SSRI antidepressant medications or placebo
Nature Mental Health
PET2BIDS: a library for converting Positron Emission Tomography data to BIDS
Journal of open source software
NeuroMark PET: Replicable positron emission tomography ICA templates for florbetapir and florbetaben radioligands
2024 46th Annual International Conference of the IEEE Engineering in …
Quantifying the impact of preprocessing strategies on statistical analyses
OHBM Annual meeting
A sensitivity analysis to quantify the impact of neuroimaging preprocessing strategies on subsequent statistical analyses
arXiv preprint arXiv:2404.14882
Assessing Image Quality Metric Alignment with Radiological Evaluation in Datasets with and without Motion Artifacts
2024 ISMRM & ISMRT Annual Meeting
The past, present, and future of the brain imaging data structure (BIDS)
Imaging Neuroscience 2, imag-2-00103
Neuroanatomical dimensions in medication-free individuals with major depressive disorder and treatment response to SSRI antidepressant medications or placebo
Nature Mental Health
Classification of Medical Text in Small and Imbalanced Datasets in a Non-English Language
Medical Imaging with Deep Learning
SmartField: A Danish Initiative for Advanced N2O Emission Accounting and Mitigation in Agriculture
AGU Fall Meeting Abstracts 2024 (1569), B33C-1569
In vivo deep learning estimation of diffusion coefficients of nanoparticles
International Conference on Medical Image Computing and Computer-Assisted …
Cardiac dose-volume analysis of 9,411 patients with registry data for cardiovascular disease and overall survival
medRxiv, 2024.08. 16.24312108
Locally orderless networks
arXiv preprint arXiv:2406.13514
Xfibrosis: Explicit vessel-fiber modeling for fibrosis staging from liver pathology images
2024 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR …
Time trends in cardiac doses in 10,000 patients receiving curative thoracic radiation therapy between 2009 and 2020
medRxiv, 2024.02. 18.24303007
Ikpls: Improved kernel partial least squares and fast cross-validation algorithms for python with cpu and gpu implementations using numpy and jax
Journal of Open Source Software
Reducing Variance in Meta-Learning via Laplace Approximation for Regression Tasks
arXiv preprint arXiv:2410.01476
Interactive perception for deformable object manipulation
IEEE Robotics and Automation Letters
Scalable motion style transfer with constrained diffusion generation
Proceedings of the AAAI Conference on Artificial Intelligence 38 (9), 10234 …
Lm2d: Lyrics-and music-driven dance synthesis
arXiv preprint arXiv:2403.09407
Goal-Conditioned Reinforcement Learning from Sub-Optimal Data on Metric Spaces
arXiv preprint arXiv:2402.10820
Learning goal-conditioned policies from sub-optimal offline data via metric learning
arXiv preprint arXiv:2402.10820
Goal-conditioned offline reinforcement learning via metric learning
arXiv preprint arXiv
Evaluating behavior trees
Robotics and Autonomous Systems
Receptors cluster in high-curvature membrane regions for optimal spatial gradient sensing
arXiv e-prints, arXiv: 2410.03395
Roles of network topology in the relaxation dynamics of simple chemical reaction network models
Scientific Reports
Learning optimal integration of spatial and temporal information in noisy chemotaxis
PNAS nexus 3 (7), pgae235
Spontaneous breaking of symmetry in overlapping cell instance segmentation using diffusion models
Biology Methods and Protocols 9 (1), bpae084
eddymotion: An open implementation of FSL's eddy with volume-to-volume artifact estimation for neuroimaging beyond diffusion MRI
OSF
Guided synthesis of labeled brain MRI data using latent diffusion models for segmentation of enlarged ventricles
arXiv preprint arXiv:2411.01351
[11C] PS13 shows pharmacologically selective binding to cyclooxygenase-1 (COX-1) in the human brain
Journal of Nuclear Medicine 65 (supplement 2)
Associations between behavioral and emotional problems and brain morphology in early adolescence: A neuroimaging study using the NRU Serotonin Atlas
OSF
Uplift modelling via gradient boosting
Proceedings of the 30th ACM SIGKDD Conference on Knowledge Discovery and …
Attenuation-adjusted deep learning of pore defects in 2D radiographs of additive manufacturing powders
arXiv preprint arXiv:2408.02427
Investigating the Role of ADGRV1 in ALS Using a Novel Mouse Model
Statistical investigations into the geometry and homology of random programs
arXiv preprint arXiv:2407.04854
A semi-automatic method for extracting mitochondrial cristae characteristics from 3D focused ion beam scanning electron microscopy data
Communications Biology 7 (1), 377
Young glial progenitor cells competitively replace aged and diseased human glia in the adult chimeric mouse brain
Nature biotechnology 42 (5), 719-730
Multiscale and multiresolution analysis
Medical Image Analysis, 177-197
Parametric volumetric registration
Medical Image Analysis, 331-354
3D Shape Analysis and Bias Correction with Persistent Homology
2023
Cross-modal conceptualization in bottleneck models
Proceedings of the 2023 Conference on Empirical Methods in Natural Language …
Test-Time Augmentation Towards Improved Cross-Center PET/CT Segmentations by the Swin UNETR
2023 IEEE Nuclear Science Symposium, Medical Imaging Conference and …
Prediction of pulp exposure before caries excavation using artificial intelligence: Deep learning-based image data versus standard dental radiographs
Journal of Dentistry
Multimodal CT and MR segmentation of head and neck organs-at-risk
International Conference on Medical Image Computing and Computer-Assisted …
Assignment theory-augmented neural network for dental arch labeling
International conference on medical image computing and computer-assisted …
A sequential framework for detection and classification of abnormal teeth in panoramic x-rays
arXiv preprint arXiv:2309.00027
Target anatomical feature localization
US Patent
The efficiency of artificial intelligence methods for finding radiographic features in different endodontic treatments-a systematic review
Acta Odontologica Scandinavica
Deep learning for detection of clinical operations in robot-assisted percutaneous renal access
IEEE Access
Machine Learning for Image-Based Radiotherapy Outcome Prediction
Artificial Intelligence in Radiation Oncology and Biomedical Physics
Two-dimensional image registration
US Patent App. 18/067
Three-dimensional instrument pose estimation
US Patent App. 18/067
Three-dimensional model reconstruction
US Patent App. 18/067
Contrastive learning approach to predict radiologist's error based on gaze data
2023 IEEE Congress on Evolutionary Computation (CEC)
Changes in radiologists’ gaze patterns against lung x-rays with different abnormalities: a randomized experiment
Journal of Digital Imaging
3DTeethSeg'22: 3D teeth scan segmentation and labeling challenge
arXiv preprint arXiv:2305.18277
HaN‐Seg: The head and neck organ‐at‐risk CT and MR segmentation dataset
Medical physics
A 178-clinical-center experiment of integrating AI solutions for lung pathology diagnosis
Scientific Reports
Extremely weakly-supervised blood vessel segmentation with physiologically based synthesis and domain adaptation
Workshop on Medical Image Learning with Limited and Noisy Data
Deep-learning-based segmentation of individual tooth and bone with periodontal ligament interface details for simulation purposes
IEEE Access
Collision-constrained deformable image registration framework for discontinuity management
Plos one
A hybrid approach to full-scale reconstruction of renal arterial network
Scientific Reports
cRedAnno+: Annotation Exploitation In Self-Explanatory Lung Nodule Diagnosis
2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI)
Deep Learning-Assisted Localisation of Nanoparticles in synthetically generated two-photon microscopy images
arXiv preprint arXiv:2303.16903
Method and system of global position prediction for imu motion capture
US Patent App. 17/892
Differentiable depth for real2sim calibration of soft body simulations
Computer Graphics Forum
Data sharing in neuroimaging: experiences from the BIDS project
Nature Reviews Neuroscience
Prediction of brain age using structural magnetic resonance imaging: A comparison of accuracy and test–retest reliability of publicly available software packages
Human Brain Mapping
Cerebral Palsy–Early Diagnosis and Intervention Trial: protocol for the prospective multicentre CP-EDIT study with focus on diagnosis, prognostic factors, and intervention
BMC pediatrics
The path toward equal performance in medical machine learning
Patterns
On (assessing) the fairness of risk score models
Proceedings of the 2023 ACM Conference on Fairness, Accountability, and …
Bias in context
Proceedings of the National Academy of Sciences of the United States of …
Bias in context: What to do when complete bias removal is not an option
Proceedings of the National Academy of Sciences
The art, science, and secrets of scanning young children
Biological Psychiatry
Are demographically invariant models and representations in medical imaging fair?
arXiv preprint arXiv:2305.01397
Association between the loudness dependence of auditory evoked potential, serotonergic neurotransmission and treatment outcome in patients with depression
European Neuropsychopharmacology
10 years of reproducibility in biomedical research: how can we achieve generalizability and fairness?
ISBI 2023-20th IEEE International Symposium on Biomedical Imaging
Deep phenotyping towards precision psychiatry of first-episode depression—the Brain Drugs-Depression cohort
BMC psychiatry
AI-based dimensional neuroimaging system for characterizing heterogeneity in brain structure and function in major depressive disorder: COORDINATE-MDD consortium design and …
BMC psychiatry
FAIMI Preface
Lecture Notes in Computer Science (including subseries Lecture Notes in …
Research Article Postprocessing of MRIs Using FreeSurfer in Epilepsy Surgery Patients Provides an Excellent Imaging Marker of Hippocampal Sclerosis but Fails to Separate Subtypes
Why is the winner the best?
Proceedings of the IEEE/CVF conference on computer vision and Pattern …
Selective MRI reacquisition to extend the working range of retrospective motion correction
2023 ISMRM & ISMRT Annual Meeting & Exhibition
Postprocessing of MRIs using FreeSurfer in epilepsy surgery patients provides an excellent imaging marker of hippocampal sclerosis but fails to separate subtypes
Acta Neurologica Scandinavica
An automatic DWI/FLAIR mismatch assessment of stroke patients
Diagnostics
Localise to segment: crop to improve organ at risk segmentation accuracy
arXiv preprint arXiv:2304.04606
Performance and agreement when annotating chest X-ray text reports—a preliminary step in the development of a deep learning-based prioritization and detection system
Diagnostics
U-Sleep: Automatic Clinical Sleep Staging
Analyzing near-infrared hyperspectral imaging for protein content regression and grain variety classification using bulk references and varying grain-to-background ratios
arXiv preprint arXiv:2311.04042
Improving deep learning on hyperspectral images of grain by incorporating domain knowledge from chemometrics
2023 IEEE/CVF International Conference on Computer Vision Workshops (ICCVW …
Refractive pose refinement: Generalising the geometric relation between camera and refractive interface
International Journal of Computer Vision
Music-and Lyrics-driven Dance Synthesis
arXiv preprint arXiv:2310.00455
Learning Geometric Representations of Objects via Interaction
Joint European Conference on Machine Learning and Knowledge Discovery in …
Controllable motion synthesis and reconstruction with autoregressive diffusion models
2023 32nd IEEE International Conference on Robot and Human Interactive …
Multimodal dance style transfer: W. Yin et al.
Machine Vision and Applications
Dance style transfer with cross-modal transformer
2023 IEEE/CVF Winter Conference on Applications of Computer Vision (WACV …
Fast detection of slender bodies in high density microscopy data
Communications Biology
Systematics, Biology and Morphology of World Polychaeta: Proceedings of the 2nd International Polychaete Conference, Copenhagen 1986 (Ophelia, Supplement 5)
Brill
Epigenetic switching with asymmetric bridging interactions
Biophysical Journal
Protocol to assess metabolic activity of Pseudomonas aeruginosa by measuring heat flow using isothermal calorimetry
STAR protocols
Delivering Rules-Based Workflows for Science
Proceedings of the SC'23 Workshops of the International Conference on High …
A Practical Approach to Estimating the Effect of Synchrotron Radiation on Sperm Motility and Viability
bioRxiv.06. 08.544169
Iron Oxide Nanoparticles as a Contrast Agent for Synchrotron Imaging of Sperm
arXiv preprint arXiv:2309.03908
Multimodal dance style transfer
Machine Vision and Applications 34 (4), 48
Morphology on categorical distributions
Journal of Mathematical Imaging and Vision 65 (6), 861-873
3D mitochondrial ultrastructure using volume electron microscopy
Ultrastructure of mitochondria in 3D from volume electron microscopy
Euromit: International meeting on mitochondrial pathology
Astrocytic engagement of the corticostriatal synaptic cleft is disrupted in a mouse model of Huntington’s disease
Proceedings of the National Academy of Sciences 120 (24), e2210719120
2022
AI-based extraction of radiologists gaze patterns corresponding to lung regions
International Conference on Intelligent Systems Design and Applications
Improved automated lesion segmentation in whole-body FDG/PET-CT via test-time augmentation
arXiv preprint arXiv:2210.07761
Semi-supervised medical image classification with temporal knowledge-aware regularization
International conference on medical image computing and computer-assisted …
A deep learning framework for vertebral morphometry and Cobb angle measurement with external validation
European spine journal
Spinopelvic measurements of sagittal balance with deep learning: systematic review and critical evaluation
European Spine Journal
Physics-based loss and machine learning approach in application to non-Newtonian fluids flow modeling
2022 IEEE Congress on Evolutionary Computation (CEC)
Artificial intelligence for the analysis of workload-related changes in radiologists’ gaze patterns
IEEE Journal of Biomedical and Health Informatics
Multi-landmark environment analysis with reinforcement learning for pelvic abnormality detection and quantification
Medical Image Analysis
Gaze-based attention to improve the classification of lung diseases
Medical Imaging 2022: Image Processing
Benefits of auxiliary information in deep learning-based teeth segmentation
Medical Imaging 2022: Image Processing
Parotid gland segmentation with nnU-Net: deployment scenario and inter-observer variability analysis
Medical Imaging 2022: Image Processing
AI-based analysis of radiologist’s eye movements for fatigue estimation: a pilot study on chest X-rays
Medical Imaging 2022: Image Perception, Observer Performance, and Technology …
Segmentation of organs-at-risk from Ct and Mr images of the head and neck: baseline results
2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI)
PROGRESS IN BIOMEDICAL OPTICS AND IMAGING-PROCEEDINGS OF SPIE
Group convolutional neural networks for DWI segmentation
Geometric deep learning in medical image analysis
Bundle geodesic convolutional neural network for diffusion-weighted imaging segmentation
Journal of Medical Imaging
LibHip: An open-access hip joint model repository suitable for finite element method simulation
Computer methods and programs in biomedicine
Pseudo-label guided image synthesis for semi-supervised covid-19 pneumonia infection segmentation
IEEE Transactions on Medical Imaging
Reducing Annotation Need in Self-explanatory Models for Lung Nodule Diagnosis
International Workshop on Interpretability of Machine Intelligence in …
Auto-segmentation of hip joints using multiplanar UNet with transfer learning
Workshop on Medical Image Learning with Limited and Noisy Data
Open-Full-Jaw: An open-access dataset and pipeline for finite element models of human jaw
Computer Methods and Programs in Biomedicine
Contact and friction simulation for computer graphics
ACM SIGGRAPH 2022 Courses
Accuracy and consistency of intensity-based deformable image registration in 4DCT for tumor motion estimation in liver radiotherapy planning
Plos one
Numerical methods for linear complementarity problems in physics-based animation
Springer Nature
Guide for Software and Selecting Methods
Numerical Methods for Linear Complementarity Problems in Physics-Based …
Fast Vortex Particle Method for Fluid-Character Interaction.
Graphics Interface
Biomedical image analysis competitions: The state of current participation practice
arXiv preprint arXiv:2212.08568
Psilocybin modulation of time-varying functional connectivity is associated with plasma psilocin and subjective effects
NeuroImage
Evaluating the performance of markerless prospective motion correction and selective reacquisition in a general clinical protocol for brain MRI
OSF
Mapping neurotransmitter systems to the structural and functional organization of the human neocortex
Nature neuroscience
Open and reproducible neuroimaging: From study inception to publication
NeuroImage
Feature robustness and sex differences in medical imaging: a case study in MRI-based Alzheimer’s disease detection
International Conference on Medical Image Computing and Computer-Assisted …
Hippocampal volume changes in a pharmacological sex-hormone manipulation risk model for depression in women
Hormones and Behavior
Evaluating the match of image quality metrics with radiological assessment in a dataset with and without motion artifacts
2022 ISMRM & SMRT Annual Meeting & Exhibition
Emotional faces processing in major depressive disorder and prediction of antidepressant treatment response: a NeuroPharm study
Journal of Psychopharmacology
PET-BIDS, an extension to the brain imaging data structure for positron emission tomography
Scientific data
Predicting treatment outcome in major depressive disorder using structural magnetic resonance imaging: a NeuroPharm study
Neuroscience Applied
Hippocampus volume and memory function in major depressive disorder-sensitivity to mood or treatment: a Neuropharm study
Neuroscience Applied
Predicting antidepressant treatment outcome in major depressive disorder using multi-domain data: A NeuroPharm study
Neuroscience Applied
Generalizability of treatment outcome prediction in major depressive disorder using structural MRI: a NeuroPharm study
NeuroImage: Clinical
Inter-and intra-observer agreement when using a diagnostic labeling scheme for annotating findings on chest X-rays—an early step in the development of a deep learning-based …
Diagnostics
Revisiting transformer-based models for long document classification
Findings of the association for computational linguistics: EMNLP
An algebra for local histograms
Frontiers in Computer Science
Attenuation correction of Total Body PET using syntetic CT derived from the emission data.
Journal of Nuclear Medicine 63 (supplement 2)
PO-1757 A framework for in-vivo, voxel-based assessment of radiation response through multimodal imaging
Radiotherapy and Oncology 170, S1561-S1562
MO-0716 Radiotherapy exposure and association with observed cardiovascular toxicity in over 5000 patients
Radiotherapy and Oncology 170, S627-S628
Reconstructing binary signals from local histograms
Entropy
RootPainter3D: Interactive‐machine‐learning enables rapid and accurate contouring for radiotherapy
Medical Physics
Information-theoretic registration with explicit reorientation of diffusion-weighted images
Journal of Mathematical Imaging and Vision
Rove-Tree-11: the not-so-wild rover a hierarchically structured image dataset for deep metric learning research
Asian Conference on Computer Vision
Hyperspectral imaging for classification of bulk grain samples with deep convolutional neural networks
Journal of Near Infrared Spectroscopy
Consensus-based normalizing-flow control: A case study in learning dual-arm coordination
2022 IEEE/RSJ International Conference on Intelligent Robots and Systems …
Back to the manifold: Recovering from out-of-distribution states
2022 IEEE/RSJ International Conference on Intelligent Robots and Systems …
Embedding Koopman optimal control in robot policy learning
2022 IEEE/RSJ International Conference on Intelligent Robots and Systems …
Enabling visual action planning for object manipulation through latent space roadmap
IEEE Transactions on Robotics
On the Subspace Structure of Gradient-Based Meta-Learning
arXiv preprint arXiv:2207.03804
Geometric multimodal contrastive representation learning
International Conference on Machine Learning
Call for Papers Focused Section on Design, Modeling, Learning and Control for Bimanual Manipulation Mechatronics
IEEE-ASME TRANSACTIONS ON MECHATRONICS
Leveraging hierarchy in multimodal generative models for effective cross-modality inference
Neural Networks
Learning geometric representations of interactive objects
Heterogeneous Full-body Control of a Mobile Manipulator with Behavior Trees
arXiv preprint arXiv:2210.08600
A stack-of-tasks approach combined with behavior trees: A new framework for robot control
IEEE Robotics and Automation Letters
Emerging diversity in a population of evolving intransitive dice
Physical Review E
Cyclic-di-GMP signaling controls metabolic activity in Pseudomonas aeruginosa
Cell reports
Transcriptomic fingerprint of bacterial infection in lower extremity ulcers
Apmis
Structural determinants of relaxation dynamics in chemical reaction networks
bioRxiv, 2022.05. 25.493374
Simultant: simultaneous curve fitting of functions and differential equations using analytical gradient calculations
BMC bioinformatics
Curvature strains as a global orchestrator of morphogenesis
Physical Review Research
Method of tracking a plurality of objects
US Patent
Correspondence between gene expression and neurotransmitter receptor and transporter density in the human brain
NeuroImage
bids-matlab
https://doi.org/10.5281/zenodo.5910585
Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in Python
10.5281/zenodo.6834519
Neuralsympcheck: A symptom checking and disease diagnostic neural model with logic regularization
International Conference on Artificial Intelligence in Medicine
Rove-tree-11: the not-so-wild rover, a hierarchically structured image dataset for deep metric learning research
Proceedings of the Asian Conference on Computer Vision, 2967-2983
Structural and functional changes in a genetic model of amyotrophic lateral sclerosis
2021
Automating cardiothoracic ratio measurements in chest X-rays
2021 International Conference" Nonlinearity, Information and Robotics"(NIR)
Mutual-prototype adaptation for cross-domain polyp segmentation
IEEE Journal of Biomedical and Health Informatics
Adversarial reconstruction loss for domain generalization
IEEE Access
Multi-agent shape models for hip landmark detection in MR scans
Medical Imaging 2021: Image Processing
Developing and validating COVID-19 adverse outcome risk prediction models from a bi-national European cohort of 5594 patients
Scientific reports
A multi-patient analysis of the center of rotation trajectories using finite element models of the human mandible
Plos one
Coupling friction with visual appearance
Proceedings of the ACM on Computer Graphics and Interactive Techniques 4 (3 …
Global position prediction for interactive motion capture
Proceedings of the ACM on Computer Graphics and Interactive Techniques 4 (3 …
Network for DWI Segmentation from Single Scan Learning
Computational Diffusion MRI: 12th International Workshop, CDMRI 2021, Held …
Bundle geodesic convolutional neural network for DWI segmentation from single scan learning
International Workshop on Computational Diffusion MRI
Cine-MRI Simulation to Evaluate Tumor Tracking
International Workshop on Simulation and Synthesis in Medical Imaging
A direct geometry processing cartilage generation method using segmented bone models from datasets with poor cartilage visibility
International Conference on Medical Image Computing and Computer-Assisted …
Mandibular teeth movement variations in tipping scenario: A finite element study on several patients
Computational Biomechanics for Medicine: Solid and Fluid Mechanics Informing …
Contact modeling from images using cut finite element solvers
Advanced Modeling and Simulation in Engineering Sciences
Locking-proof tetrahedra
ACM Transactions on Graphics (TOG)
gradsim: Differentiable simulation for system identification and visuomotor control
arXiv preprint arXiv:2104.02646
https://gradsim. github. io
arXiv preprint arXiv:2104.02646
Psilocybin modulation of dynamic functional connectivity is associated with plasma psilocin and subjective effects
medRxiv, 2021.12. 17.21267992
Characterisation of children's head motion for magnetic resonance imaging with and without general anaesthesia
Frontiers in radiology
P. 0567 Precision medicine in the treatment of first-episode depression–establishing the BrainDrugs-Depression Cohort
European Neuropsychopharmacology 53, S416-S417
P. 0054 The braindrugs-epilepsy cohort-precision medicine in the treatment of epilepsy
European Neuropsychopharmacology 53, S39-S40
The positron emission tomography brain imaging data structure (PET-BIDS) extension: A new standard for sharing PET data
JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM 41 (1_ SUPPL)
NeuroPharm study: EEG wakefulness regulation as a biomarker in MDD
Journal of Psychiatric Research
Centering inclusivity in the design of online conferences—An OHBM–Open Science perspective
GigaScience 10 (8), giab051
Pretreatment qEEG biomarkers for predicting pharmacological treatment outcome in major depressive disorder: Independent validation from the NeuroPharm study
European Neuropsychopharmacology
Assessing Bias in Medical AI
ICML 2021 Workshop Interpretable Machine Learning in Healthcare
A high-resolution in vivo atlas of the human brain's benzodiazepine binding site of GABA (A) receptors
Neuroimage
A high-resolution in vivo atlas of the human brain's benzodiazepine binding site of GABAA receptors
Neuroimage
Reward processing in major depressive disorder and prediction of treatment response–Neuropharm study
European Neuropsychopharmacology
The added effect of artificial intelligence on physicians’ performance in detecting thoracic pathologies on CT and chest X-ray: A systematic review
Diagnostics
A framework for voxel‐based assessment of biological effect after proton radiotherapy in pediatric brain cancer patients using multi‐modal imaging
Medical physics
First order locally orderless registration
International Conference on Scale Space and Variational Methods in Computer …
U-Sleep: resilient high-frequency sleep staging
NPJ digital medicine
Is Dose Accumulation in online MR-guided treatment of Liver metastases Reproducible?
Radiotherapy and Oncology 161, S1278-S1280
Predicting protein content in grain using hyperspectral deep learning
2021 IEEE/CVF International Conference on Computer Vision Workshops (ICCVW …
Absolute and relative pose estimation in refractive multi view
2021 IEEE/CVF International Conference on Computer Vision Workshops (ICCVW …
How to sense the world: Leveraging hierarchy in multimodal perception for robust reinforcement learning agents
arXiv preprint arXiv:2110.03608
Graph-based task-specific prediction models for interactions between deformable and rigid objects
2021 IEEE/RSJ International Conference on Intelligent Robots and Systems …
Learning deep energy shaping policies for stability-guaranteed manipulation
IEEE Robotics and Automation Letters
Graph-based normalizing flow for human motion generation and reconstruction
2021 30th IEEE international conference on robot & human interactive …
Learning stable normalizing-flow control for robotic manipulation
2021 IEEE International Conference on Robotics and Automation (ICRA)
Modeling, learning, perception, and control methods for deformable object manipulation
Science Robotics 6 (54), eabd8803
Long-term Human Motion Generation and Reconstruction Using Graph-based Normalizing Flow
arXiv
Dynamic environments with deformable objects
Thirty-fifth Conference on Neural Information Processing Systems Datasets …
Learning Deep Neural Policies with Stability Guarantees
Superspreading of airborne pathogens in a heterogeneous world
Scientific reports
Comparative Studies in the A30P and A53T α-Synuclein C. elegans Strains to Investigate the Molecular Origins of Parkinson's Disease
Frontiers in cell and developmental biology
Variability of individual infectiousness derived from aggregate statistics of Covid-19
medRxiv, 2021.01. 15.21249870
Automated segmentation of deep brain nuclei using convolutional neural networks and susceptibility weighted imaging
Human Brain Mapping
Reproducibility of findings in modern PET neuroimaging: insight from the NRM2018 grand challenge
Journal of Cerebral Blood Flow & Metabolism
2020
Extracting clinical information from chest X-ray reports: A case study for Russian language
2020 international conference nonlinearity, information and robotics (NIR)
Adopting Confident Learning to Eliminate Uncertainty in Chest X-ray Images for Lung Nodules Prediction
International Journal of Radiation Oncology, Biology, Physics
Automated Localization of Lung Nodules from Chest X-rays With Deep Neural Networks
International Journal of Radiation Oncology, Biology, Physics
Joint spatial-wavelet dual-stream network for super-resolution
International conference on medical image computing and computer-assisted …
Deep learning for diagnosis and segmentation of pneumothorax: the results on the kaggle competition and validation against radiologists
IEEE Journal of Biomedical and Health Informatics
Evaluation of deep learning methods for bone suppression from dual energy chest radiography
International Conference on Artificial Neural Networks
Low dose 4D-CT super-resolution reconstruction via inter-plane motion estimation based on optical flow
Biomedical Signal Processing and Control
Auto‐segmentation of organs at risk for head and neck radiotherapy planning: from atlas‐based to deep learning methods
Medical physics 47 (9), e929-e950
Primal/dual descent methods for dynamics
Computer Graphics Forum
Local optimization for robust signed distance field collision
Proceedings of the ACM on Computer Graphics and Interactive Techniques 3 (1 …
Stefan Jeschke
Proceedings of the ACM on Computer Graphics and Interactive Techniques
The Matchstick Model for Anisotropic Friction Cones
Computer Graphics Forum
Kan kunstig intelligens give fair forudsigelser?
https://videnskab.dk/forskerzonen/teknologi-innovation/kan-kunstig …
False positive rates in positron emission tomography (PET) voxelwise analyses
Journal of Cerebral Blood Flow & Metabolism
Restoring drifted electron microscope volumes using synaptic vesicles at sub-pixel accuracy
Communications biology
Latent space roadmap for visual action planning of deformable and rigid object manipulation
2020 IEEE/RSJ International Conference on Intelligent Robots and Systems …
Stability-guaranteed reinforcement learning for contact-rich manipulation
IEEE Robotics and Automation Letters
In-hand manipulation of objects with unknown shapes
2020 IEEE International Conference on Robotics and Automation (ICRA)
Data-efficient model learning and prediction for contact-rich manipulation tasks
IEEE robotics and automation letters
Benchmarking bimanual cloth manipulation
IEEE Robotics and Automation Letters
Airborne Pathogens in a Heterogeneous World: Superspreading & Mitigation
medRxiv, 2020.10. 24.20218784
Metabolic flux fingerprinting differentiates planktonic and biofilm states of Pseudomonas aeruginosa and Staphylococcus aureus
BioRxiv, 2020.07. 15.203828
Optimal transport flows for distributed production networks
Physical Review Letters
nipy/nipype: 1.5. 1
Zenodo
Different preprocessing strategies lead to different conclusions: A [11C]DASB-PET reproducibility study
Journal of Cerebral Blood Flow and Metabolism
Guidelines for the content and format of PET brain data in publications and archives: a consensus paper
Journal of Cerebral Blood Flow & Metabolism
JCB905433 Supplemental Material1-Supplemental material for Guidelines for the content and format of PET brain data in publications and archives: A consensus paper
(No Title)
Estimating PET partial volume full-width-half-maximum directly from human data
Deep learning for identification of critical regions associated with toxicities after liver stereotactic body radiation therapy
Medical physics
Automated hepatobiliary toxicity prediction after liver stereotactic body radiation therapy with deep learning-based portal vein segmentation
Neurocomputing
Contour-aware multi-label chest X-ray organ segmentation
International Journal of Computer Assisted Radiology and Surgery
P. 282 Hippocampal volume changes are linked to depressive symptoms independent of sex-steroid hormone manipulation: a pharmacological structural MRI study
European Neuropsychopharmacology 40, S159-S160
Optimizing a preprocessing pipeline for structural 7T MR analyses in FreeSurfer
International Society of Magnetic Resonance in Medicine
Predicting treatment outcome in major depressive disorder using serotonin 4 receptor PET brain imaging, functional MRI, cognitive-, EEG-based, and peripheral biomarkers: a …
Frontiers in psychiatry
The structure of the serotonin system: A PET imaging study
Neuroimage
Algoritmer kopierer lægers fordomme om race og køn
Politiken
2019
High fidelity simulation of corotational linear FEM for incompressible materials
Proceedings of the 12th ACM SIGGRAPH Conference on Motion, Interaction and …
Non-smooth newton methods for deformable multi-body dynamics
ACM Transactions on Graphics (TOG)
Automated acquisition of anisotropic friction
2019 16th Conference on Computer and Robot Vision (CRV)
Data driven inverse kinematics of soft robots using local models
2019 International conference on robotics and automation (ICRA)
A validated physical model for real-time simulation of soft robotic snakes
2019 International Conference on Robotics and Automation (ICRA)
Solving inverse kinematics using exact Hessian matrices
Computers & Graphics
Topaware: Topology-aware registration
International Conference on Medical Image Computing and Computer-Assisted …
Accuracy of Deformable Image Registration in Radiotherapy for Liver Cancer
Deterministic Group Tractography with Local Uncertainty Quantification
International Conference on Medical Image Computing and Computer-Assisted …
Voxel-based assessment of proton RBE in paediatric brain cancer radiotherapy from multimodal imaging
Radiotherapy and Oncology 133, S1043-S1044
U-Time: A Fully Convolutional Network for Time Series Segmentation Applied to Sleep Staging
ArXiv
What can physicians expect from deep learning in daily practice?
European Symposium on Vascular Biomaterials. 11th: Biomaterials and Digital …
Pre-harvest weed mapping of Cirsium arvense in wheat and barley with off-the-shelf UAVs
Precision Agriculture
A cross-center smoothness prior for variational Bayesian brain tissue segmentation
International Conference on Information Processing in Medical Imaging
Deep learning for detection of railway signs and signals
Science and Information Conference
An ensemble inverse optimal control approach for robotic task learning and adaptation
Autonomous Robots
Probabilistic model learning and long-term prediction forcontact-rich manipulation tasks
CoRR, vol. abs/1909.04915
Research Article The Influence of Speed and Position in Dynamic Gesture Recognition for Human-Robot Interaction
The Influence of Speed and Position in Dynamic Gesture Recognition for Human‐Robot Interaction
Journal of Sensors
Self-assembly, buckling and density-invariant growth of three-dimensional vascular networks
Journal of the Royal Society Interface
P. 263 The impact of different preprocessing strategies in positron emission tomography: a [11C] DASB Study
European Neuropsychopharmacology 29, S197-S198
Preprocessing, Prediction and Significance: Framework and Application to Brain Imaging
Medical Image Computing and Computer Assisted Intervention - MICCAI 2019 …
The impact of different preprocessing strategies in PET neuroimaging: A [C-11] DASB-PET study
JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM
Optimization of preprocessing strategies in Positron Emission Tomography (PET) neuroimaging: A [11C] DASB PET study
NeuroImage
Cerebral serotonin transporter measurements with [11C]DASB: A review on acquisition and preprocessing across 21 PET centres
Journal of Cerebral Blood Flow & Metabolism
Optimizing Preprocessing Pipelines in PET/MR Neuroimaging
København: Eget forlag
HIGH-THROUGHPUT RAT BRAIN PET IMAGING AND AUTOMATIC SPATIAL NORMALIZATION OF THE DOPAMINE D2/3 RECEPTOR LIGAND [18F] FALLYPRIDE
Densely connected neural network with unbalanced discriminant and category sensitive constraints for polyp recognition
IEEE transactions on automation science and engineering
Deep neural network ensemble for pneumonia localization from a large-scale chest x-ray database
Computers & electrical engineering
Data augmentation for chest pathologies classification
2019 IEEE 16th international symposium on biomedical imaging (ISBI 2019 …
Neural networks for deep radiotherapy dose analysis and prediction of liver SBRT outcomes
IEEE journal of biomedical and health informatics
Prostate cancer classification with multiparametric MRI transfer learning model
Medical physics
Minimal variance sampling in stochastic gradient boosting
Advances in Neural Information Processing Systems
2018
Methodology for assessing mesh-based contact point methods
ACM Transactions on Graphics (TOG)
Local Models for Data Driven Inverse Kinematics of Soft Robots.
Symposium on Computer Animation (Posters)
VRIPHYS 18: 14th Workshop on Virtual Reality Interactions and Physical Simulations
VRIPHYS 18: 14h Workshop on Virtual Reality Interactions and Physical …
Foreword to the Special Section on VRIPHYS 2018
Computers and Graphics 76, A3-A4
Automatic Geometry Correction for a Kinect-Projector System in Dynamic Environment
Workshop on Virtual Reality Interaction and Physical Simulation VRIPHYS
An average of the human ear canal: Recovering acoustical properties via shape analysis
arXiv preprint arXiv:1811.03848
Brain extraction and segmentation framework for bias field rich cranial MRI scans of rats
Annual meeting ISMRM, Paris, France
Brain Segmentation in Rodent MR-Images Using Convolutional Neural Networks
Joint Annual Meeting ISMRM-ESMRMB
Safety and Efficacy of Autologous Tissue-derived Mesenchymal Stem Cells for Radiation-Induced Xerostomia: A Randomized, Placebo-Controlled Phase I/II Trial (MESRIX)
International Journal of Radiation Oncology• Biology• Physics
Do children perceive whether a robotic peer is learning or not?
Proceedings of the 2018 ACM/IEEE international conference on human-robot …
Incorporating human expertise in robot motion learning and synthesis
EPFL
Boosting Robot Learning and Control with Domain Constraints
Robotics: Science and Systems: RSS Pioneer Workshop
Physical and Stochastic Aspects of Microorganism Behaviour
Massively parallel C. elegans tracking provides multi-dimensional fingerprints for phenotypic discovery
Journal of neuroscience methods
The role of tumbling frequency and persistence in optimal run-and-tumble chemotaxis
IMA Journal of Applied Mathematics
The noisy basis of morphogenesis: Mechanisms and mechanics of cell sheet folding inferred from developmental variability
PLoS biology
Multistep Inhibition of α-Synuclein Aggregation and Toxicity in Vitro and in Vivo by Trodusquemine
ACS chemical biology
Seasonality-resilient individuals downregulate their cerebral 5-HT transporter binding in winter – A longitudinal combined 11 C-DASB and 11 C-SB207145 PET study
Eur Neuropsychopharmacol
The impact of preprocessing pipeline choice in univariate and multivariate analyses of PET data
2018 International Workshop on Pattern Recognition in Neuroimaging (PRNI)
Low 5-HT1B receptor binding in the migraine brain: A PET study
Cephalalgia
High brain serotonin levels in migraine between attacks: A 5-HT4 receptor binding PET study
NeuroImage: Clinical
Predicting Survival after Liver SBRT by Deep Learning-Based Analysis of Treatment Dose Plans
International Journal of Radiation Oncology, Biology, Physics
Learning deconvolutional deep neural network for high resolution medical image reconstruction
Information Sciences
Development of deep neural network for individualized hepatobiliary toxicity prediction after liver SBRT
Medical physics
Deep 3D dose analysis for prediction of outcomes after liver stereotactic body radiation therapy
International Conference on Medical Image Computing and Computer-Assisted …
RIIS-DenseNet: Rotation-invariant and image similarity constrained densely connected convolutional network for polyp detection
International conference on medical image computing and computer-assisted …
Segmentation of parotid glands from registered CT and MR images
Physica Medica
Convolutional Neural Networks for Identifying Correlation Between Dose Patterns Associated with Poor Survival and Early Local Recurrence After Metastatic Liver SBRT
MEDICAL PHYSICS 45 (6), E415-E415
Superpixel-based and boundary-sensitive convolutional neural network for automated liver segmentation
Physics in Medicine & Biology
Strategies for prediction and mitigation of radiation-induced liver toxicity
Journal of radiation research 59 (suppl_1), i40-i49
Pre-intervention test-retest reliability of EEG and ERP over four recording intervals
International Journal of Psychophysiology
Comparing fully automated state-of-the-art cerebellum parcellation from magnetic resonance images
Neuroimage
Multi-view consensus CNN for 3D facial landmark placement
Proceedings of the Asian Conference on Computer Vision (ACCV)
2017
Chunked bounding volume hierarchies for fast digital prototyping using volumetric meshes
IEEE transactions on visualization and computer graphics
A fast linear complementarity problem solver for fluid animation using high level algebra interfaces for GPU libraries
Computers & Graphics
Inverse kinematics problems with exact hessian matrices
Proceedings of the 10th International Conference on Motion in Games
Modeling Virtual Humans
IEEE Computer Graphics and Applications
Rigid body contact problems using proximal operators
Proceedings of the ACM SIGGRAPH/Eurographics Symposium on Computer Animation …
Constraint reordering for iterative multi-body simulation with contact
ECCOMAS Thematic Conference on Multibody Dynamic
A fast linear complementarity problem (LCP) solver for separating fluid-solid wall boundary conditions
Proceedings of the 13th Workshop on Virtual Reality Interactions and …
A numerical strategy for finite element modeling of frictionless asymmetric vocal fold collision
International Journal for Numerical Methods in Biomedical Engineering 33 (2 …
VRIPHYS 17: 13th Workshop on Virtual Reality Interactions and Physical Simulations
Collocation for diffeomorphic deformations in medical image registration
IEEE Transactions on Pattern Analysis and Machine Intelligence
[P4–225]: HIPPOCAMPAL TEXTURE PREDICTS RATE OF COGNITIVE DECLINE IN MILD COGNITIVE IMPAIRMENT
Alzheimer's & Dementia 13 (7S_Part_28), P1356-P1356
First-in-man mesenchymal stem cells for radiation-induced xerostomia (MESRIX): study protocol for a randomized controlled trial
Trials
In vivo study of the human ear canal using contrast-enhanced MRI
25th Annual Meeting of the International Society for Magnetic Resonance in …
3D analysis of synaptic vesicle density and distribution after acute foot‐shock stress by using serial section transmission electron microscopy
Journal of Microscopy
Big universe, big data: machine learning and image analysis for astronomy
IEEE Intelligent Systems
Sacrificing information for the greater good: how to select photometric bands for optimal accuracy
Monthly Notices of the Royal Astronomical Society
Affect of robot's competencies on children's perception
Proceedings of the 16th Conference on Autonomous Agents and MultiAgent …
Associate latent encodings in learning from demonstrations
Proceedings of the AAAI conference on artificial intelligence
Dynamic gesture recognition for social robots
International Conference on Social Robotics
Mechanics and Variability of Cell Sheet Folding in the Embryonic Inversion of $ Volvox$
arXiv preprint arXiv:1708.07765
Intra-chain organisation of hydrophobic residues controls inter-chain aggregation rates of amphiphilic polymers
The Journal of Chemical Physics
A natural product inhibits the initiation of alpha-synuclein aggregation and suppresses its toxicity
Proceedings of the National Academy of Sciences of the United States of …
Brain networks implicated in seasonal affective disorder: a neuroimaging PET study of the serotonin transporter
Frontiers in neuroscience
Seasonality-resilient individuals downregulate their cerebral serotonin transporter binding in winter while 5-HT levels appear unchanged: A longitudinal combined 11C-DASB and …
Feasibility of multiparametric imaging with PET/MR in head and neck squamous cell carcinoma
Journal of Nuclear Medicine
Combining deep learning with anatomical analysis for segmentation of the portal vein for liver SBRT planning
Physics in Medicine & Biology
Deep learning-based autosegmentation of portal vein for prediction of central liver toxicity after SBRT
International Journal of Radiation Oncology, Biology, Physics 99 (2), E672
Intervertebral disc segmentation in MR images with 3D convolutional networks
Medical Imaging 2017: Image Processing
Segmentation of pathological structures by landmark-assisted deformable models
IEEE transactions on medical imaging
Segmentation of organs‐at‐risks in head and neck CT images using convolutional neural networks
Medical physics
Augmenting atlas-based liver segmentation for radiotherapy treatment planning by incorporating image features proximal to the atlas contours
Physics in Medicine & Biology
Landmark-based statistical shape representations
Statistical shape and deformation analysis
Fully automated quantitative cephalometry using convolutional neural networks
Journal of Medical Imaging
Evaluation and comparison of 3D intervertebral disc localization and segmentation methods for 3D T2 MR data: A grand challenge
Medical image analysis
BASELINE RELIABILITY OF EEG AND ERP IN A FOUR-WAY CROSSOVER STUDY IN HEALTHY SUBJECTS
PSYCHOPHYSIOLOGY 54, S59-S59
Cerebellar heterogeneity and its impact on PET data quantification of 5-HT receptor radioligands
Journal of Cerebral Blood Flow & Metabolism
Permutations Tests for Binary Classification:Revisited
Pattern Recognition in Neuroimaging (PRNI), 2017 International Workshop on
A High-Resolution In Vivo Atlas of the Human Brain's Serotonin System
The Journal of Neuroscience
Crowdsourcing for error detection in cortical surface delineations
International journal of computer assisted radiology and surgery
2016
A Statistical Model for Simultaneous Template Estimation, Bias Correction, and Registration of 3D Brain Images
Bayesian and grAphical Models for Biomedical Imaging
The minimal energetic requirement of sustained awareness after brain injury
Current Biology
RESTING-STATE BRAIN ENERGY METABOLISM PREDICTS LEVEL AND CONTENT OF CONSCIOUSNESS AFTER SEVERE BRAIN INJURY
JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM
Structural parcellation of the thalamus using shortest-path tractography
2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI)
Finding significantly connected voxels based on histograms of connection strengths
Medical Imaging 2016: Image Processing
Combining the boundary shift integral and tensor-based morphometry for brain atrophy estimation
Medical Imaging 2016: Image Processing
Deformation-based atrophy computation by surface propagation and its application to Alzheimer’s disease
Journal of Medical Imaging
Recycling on a Cosmic Scale
Special section on 19th Scandinavian conference on image analysis (SCIA 2015)
Pattern Recognition Letters
Droner til monitering af flerårigt ukrudt i korn
Bekæmpelsesmiddelforskning
Synthesizing robotic handwriting motion by learning from human demonstrations
Proceedings of the 25th International Joint Conference on Artificial …
Aerotaxis in the closest relatives of animals
eLife Sciences Publications Ltd
Filter-feeding, near-field flows, and the morphologies of colonial choanoflagellates
American Physical Society
Feeding, Swimming and Navigation of Colonial Microorganisms
APS Division of Fluid Dynamics Meeting Abstracts, H39
Fluctuations in the kinetics of linear protein self-assembly
Physical review letters
Molecular mechanisms of protein aggregation from global fitting of kinetic models
Nature protocols
Motility of Colonial Choanoflagellates and the Statistics of Aggregate Random Walkers
American Physical Society
Development of a novel deep learning algorithm for autosegmentation of clinical tumor volume and organs at risk in head and neck radiation therapy planning
International Journal of Radiation Oncology, Biology, Physics 96 (2), S226
A benchmark for comparison of dental radiography analysis algorithms
Medical image analysis
TH‐CD‐206‐05: Machine‐Learning Based Segmentation of Organs at Risks for Head and Neck Radiotherapy Planning
Medical physics 43 (6Part46)
Accurate landmark-based segmentation by incorporating landmark misdetections
2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI)
A multi-center milestone study of clinical vertebral CT segmentation
Computerized medical imaging and graphics
Serotonin 2A receptor agonist binding in the human brain with [11C] Cimbi-36: test–retest reproducibility and head-to-head comparison with the antagonist [18F] altanserin
Neuroimage
2015
Kernel bundle diffeomorphic image registration using stationary velocity fields and wendland basis functions
IEEE transactions on medical imaging
Locally orderless registration for diffusion weighted images
International Conference on Medical Image Computing and Computer-Assisted …
Diffeomorphic image registration with automatic time-step adjustment
2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI)
Automatic correction of dental artifacts in PET/MRI
Journal of Medical Imaging
Image registration using stationary velocity fields parameterized by norm-minimizing wendland kernel
Medical Imaging 2015: Image Processing
Multimodal Brain Extraction from Structural MRI using Co-registered FDG-PET
CMMI Workshop MICCAI
Nearest neighbor density ratio estimation for large-scale applications in astronomy
Astronomy and Computing
Image Analysis: 19th Scandinavian Conference, SCIA 2015, Copenhagen, Denmark, June 15-17, 2015. Proceedings
Springer
Image Analysis.: Proceedings. 19th Scandinavian Conference, SCIA 2015Copenhagen, Denmark, June 15–17, 2015
19th Scandinavian Conference on Image Analysis
Pre-harvest assessment of perennial weeds in cereals based on images from unmanned aerial systems (UAS)
17th European Weed Research Society Symposium “Weed management in changing …
Bidirectional learning of handwriting skill in human-robot interaction
Proceedings of the Tenth Annual ACM/IEEE International Conference on Human …
Estimation of Regional Seasonal Variations in SERT-levels using the FreeSurfer PET pipeline: a reproducibility study
Proceedings of the MICCAI workshop on computational methods for molecular …
Deformable model-based segmentation of intervertebral discs from MR spine images by using the SSC descriptor
International Workshop and Challenge on Computational Methods and Clinical …
Computerized cephalometry by game theory with shape-and appearance-based landmark refinement
Proceedings of International Symposium on Biomedical imaging (ISBI)
Optimal reinforcement of training datasets in semi-supervised landmark-based segmentation
Medical Imaging 2015: Image Processing
Evaluation and comparison of anatomical landmark detection methods for cephalometric x-ray images: a grand challenge
IEEE transactions on medical imaging
Interpolation-based shape-constrained deformable model approach for segmentation of vertebrae from CT spine images
Recent advances in computational methods and clinical applications for spine …
Interpolation-based detection of lumbar vertebrae in CT spine images
Recent Advances in Computational Methods and Clinical Applications for Spine …
An improved shape-constrained deformable model for segmentation of vertebrae from CT lumbar spine images
Recent Advances in Computational Methods and Clinical Applications for Spine …
Segmentation of tongue muscles from super-resolution magnetic resonance images
Medical image analysis
A framework for automated spine and vertebrae interpolation-based detection and model-based segmentation
IEEE transactions on medical imaging
Relevant feature set estimation with a knock-out strategy and random forests
NeuroImage
High-resolution surface and volume-based in vivo atlas of the serotonin system in the healthy brain
Human Brain Mapping
Vermis - to exclude or not exclude? Defining a proper reference region for PET modelling of the serotonin system
12th International Conference on Quantification of Brain Function with PET
Serotonin 2A receptor agonist binding in the human brain with [11C] Cimbi-36: test-retest reproducibility and comparison with [18F] altanserin
European Neuropsychopharmacology 25, S309-S310
2014
Photon differential splatting for rendering caustics
Computer Graphics Forum
Interactive simulation of rigid body dynamics in computer graphics
Computer graphics forum
Proceedings of the ACM SIGGRAPHEurographics Symposium on Computer Animation
Eurographics Association
Finite element modeling of the vocal folds with deformable interface tracking
7th Forum Acusticum
Disjoint domains interactions framework for hyperelastic simulations
11th World Congress on Computational Mechanics
Stepwise inverse consistent euler’s scheme for diffeomorphic image registration
International Workshop on Biomedical Image Registration
IC‐P‐131: WHITE MATTER HYPOINTENSITY GROWTH RATE CORRELATES WITH RATE OF BRAIN ATROPHY
Alzheimer's & Dementia 10, P75-P76
Estimating the thickness of ultra thin sections for electron microscopy by image statistics
2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI)
Automatic FDG-PET-based tumor and metastatic lymph node segmentation in cervical cancer
Medical Imaging 2014: Image Processing
Civile Droner i Danmark: Kortlægning og teknologivurdering
Teknologi Rådet
Civile droner i Danmark: Potentialer, udfordringer og anbefalinger
Teknologirådet
Active learning with support vector machines
Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery 4 (4 …
Erratum to: Interesting Interest Points
International Journal of Computer Vision
Learning cost function and trajectory for robotic writing motion
2014 IEEE-RAS International Conference on Humanoid Robots
Learning object-level impedance control for robust grasping and dexterous manipulation
2014 IEEE International Conference on Robotics and Automation (ICRA)
Easyworm: an open-source software tool to determine the mechanical properties of worm-like chains
Source code for biology and medicine
Differences in nucleation behavior underlie the contrasting aggregation kinetics of the Aβ40 and Aβ42 peptides
Proceedings of the National Academy of Sciences
a.; Dobson, CM; Linse, S.; Knowles
TPJ
Theories of Active Matter with Applications to Endothelial Cell Motility
Niels Bohr Institute, Copenhagen University
Non-Parametric Bayesian Modeling of Complex Networks using a Bernoulli-Poisson Model
Dynamics of Complex Topological Excitable Networks: Parallel Computing on Graphical Processing Units
Real-Time Automatic Detection of Childhood Epilepsy Seizures on an Android Device
Segmentation of vertebrae from 3D spine images by applying concepts from transportation and game theories
Computational Methods and Clinical Applications for Spine Imaging …
Automatic cephalometric X-ray landmark detection by applying game theory and random forests
Proc. ISBI Int. Symp. on Biomedical Imaging
Shape representation for efficient landmark-based segmentation in 3-D
IEEE transactions on medical imaging
Segmentation of Medical Images by Game-theoretic Approaches: PhD Thesis
B. Ibragimov
Approximate false positive rate control in selection frequency for random forest
arXiv preprint arXiv:1410.2838
2013
RPI-MATLAB-Simulator: A Tool for Efficient Research and Practical Teaching in Multibody Dynamics.
VRIPHYS
Multiphase flow of immiscible fluids on unstructured moving meshes
IEEE transactions on visualization and computer graphics
IC‐P‐059: Localized cerebral atrophy acceleration during Alzheimer's disease
Alzheimer's & Dementia 9, P36-P37
Cube propagation for focal brain atrophy estimation
2013 IEEE 10th International Symposium on Biomedical Imaging
Automatic measurement of wrist synovitis from contrast-enhanced MRI: a registration-centered approach
Medical Imaging 2013: Image Processing
Hippocampal Texture Predicts One-Year Hippocampal Atrophy in Mild Cognitively Impaired Subjects
European Congress of Radiology-ECR
Nearest neighbour regression outperforms model-based prediction of specific star formation rate
2013 IEEE international conference on big data
Unscented Kalman filtering on Riemannian manifolds
Journal of mathematical imaging and vision
Shape index descriptors applied to texture-based galaxy analysis
Proceedings of the IEEE International Conference on Computer Vision
Statistical shape representation with landmark clustering by solving the assignment problem
Medical Imaging 2013: Image Processing
An improved optimization method for the relevance voxel machine
International Workshop on Machine Learning in Medical Imaging
The improved relevance voxel machine
Technical University of Denmark
On Feature Relevance in Image-based Prediction Models: An Empirical Study
4th International Workshop for Machine Learning in Medical Imaging in …
2012
A joint-constraint model for human joints using signed distance-fields
Multibody System Dynamics
Locally orderless registration
IEEE transactions on pattern analysis and machine intelligence
Jet-based local image descriptors
European Conference on Computer Vision
Spatial measures between human poses for classification and understanding
International Conference on Articulated Motion and Deformable Objects
Natural metrics and least-committed priors for articulated tracking
Image and Vision Computing 30 (6-7)
HUMIM Software for Articulated Tracking
Technical report, DIKU, University of Copenhagen
Interesting interest points–a survey of interest point performance on a unique data set
International Journal of Computer Vision 97 (1), 18--35
Modelling electrolyte conductivity in a water electrolyzer cell
International journal of hydrogen energy
A game-theoretic framework for landmark-based image segmentation
IEEE Transactions on Medical Imaging
Automated measurement of anterior and posterior acetabular sector angles
Medical Imaging 2012: Computer-Aided Diagnosis
Automatic segmentation of polyps in colonoscopic narrow-band imaging data
IEEE Transactions on Biomedical Engineering
Distribution, size, and shape of abdominal aortic calcified deposits and their relationship to mortality in postmenopausal women
International Journal of Biomedical Imaging
Evaluation of bias in brain atrophy estimation
NIBAD'12
Data driven constraints for the svm
International Workshop on Machine Learning in Medical Imaging
IC‐P‐013: Hippocampal texture provides volume independent information for Alzheimer's diagnosis
Alzheimer's & Dementia 8 (4S_Part_1), P15-P15
In the July 2012 abstract issue of Alzheimer’s & Dementia (Volume 8, Issue 4, Supplement 2), the following errors were found: The order of authors in IC-P-013 and P1-157 …
Alzheimer’s & Dementia
2011
Time adaptive approximate SPH
Workshop on Virtual Reality Interaction and Physical Simulation VRIPHYS
Mathematical foundation of the optimization-based fluid animation method
Proceedings of the 2011 ACM SIGGRAPH/Eurographics Symposium on Computer …
A hyper elasticity method for interactive virtual design of hearing aids: A parallel method for general non-linear hyper elasticity modeling
The Visual Computer
A projected back-tracking line-search for constrained interactive inverse kinematics
Computers & Graphics
Interactive Rigid Body Contact Force Problems
Predicting articulated human motion from spatial processes
International Journal of Computer Vision
Data-driven importance distributions for articulated tracking
International Workshop on Energy Minimization Methods in Computer Vision and …
An empirical study on the performance of spectral manifold learning techniques
International Conference on Artificial Neural Networks
Unscented kalman filtering for articulated human tracking
Scandinavian conference on Image analysis
Finding the best feature detector-descriptor combination
2011 international conference on 3d imaging, modeling, processing …
Segmentation of lung fields by game theory and dynamic programming
the 4th International Workshop on Pulmonary Image Analysis, PIA
Boundary detection by linear programming with application to lung fields segmentation
Medical Imaging 2011: Image Processing
Abdominal aortic calcification quantified by the Morphological Atherosclerotic Calcification Distribution (MACD) index is associated with features of the metabolic syndrome
BMC cardiovascular disorders
A bayesian framework for automated cardiovascular risk scoring on standard lumbar radiographs
IEEE Transactions on Medical Imaging
Detection and Analysis of Calcified Deposits and Their Relation to Cardiovascular Diseases
https://di.ku.dk/english/research/phd/phd-theses/2011 …
Higher-Order Momentum Distributions and Locally Affine LDDMM Registration
arXiv preprint arXiv:1112.3166
Generalized partial volume: An inferior density estimator to parzen windows for normalized mutual information
Biennial International Conference on Information Processing in Medical …
Efficient hyperelastic regularization for registration
Scandinavian Conference on Image Analysis
Jacobians for Lebesgue Registrations for a range of Sim ilarity Measures
Department of Computer Science, University of Copenhagen
The cartilage bone junction and its implication for deep canal hearing instrument fittings
The Hearing Journal
2010
Optimization-based Fluid Simulation on Unstructured Meshes.
VRIPHYS
GPU accelerated likelihoods for stereo-based articulated tracking
European Conference on Computer Vision
A Parallel Gauss-Seidel Method for Computing Contact Forces
Master Thesis
Local jointlimits using distance field cones in euler angle space
Computer graphics international
A nonsmooth nonlinear conjugate gradient method for interactive contact force problems
The Visual Computer
Photon differentials in space and time
International Conference on Computer Vision, Imaging and Computer Graphics …
Temporal photon differentials
International Conference on Computer Graphics Theory and Applications
A nonlinear vertex-based model for animation of two-dimensional dry foam
International Conference on Computer Graphics Theory and Applications
Den digitale revolution: fortællinger fra datalogiens verden
University of Copenhagen
Projected gauss-seidel subspace minimization method for interactive rigid body dynamics
GRAPP’10: Proceedings of the Fifth International Conference on Computer …
Normal and Friction Stabilization Techniques for Interactive Rigid Body Constraint-based Contact Force Computations.
VRIPHYS
A Triangle Bending Constraint Model for Position-Based Dynamics.
Vriphys
Heuristic convergence rate improvements of the projected Gauss–Seidel method for frictional contact problems
Vaclav Skala-Union Agency
Stick it! articulated tracking using spatial rigid object priors
Asian Conference on Computer Vision
Gaussian-like spatial priors for articulated tracking
European Conference on Computer Vision
On recall rate of interest point detectors
5th International Symposium on 3D Data Processing, Visualization and …
Optics based motion measurement for a catheter navigation system: A novel and low cost approach
International Conference on Intelligent Robotics and Applications
Design of a humanoid robot simulation platform based on MRDS
Shanghai Jiaotong Daxue Xuebao/Journal of Shanghai Jiaotong University 44 …
Distribution, size, shape, growth potential and extent of abdominal aortic calcified deposits predict mortality in postmenopausal women
BMC cardiovascular disorders
Growth patterns of abdominal atherosclerotic calcified deposits from lumbar lateral X-rays
The international journal of cardiovascular imaging
Patch-based generative shape model and mdl model selection for statistical analysis of archipelagos
International Workshop on Machine Learning in Medical Imaging
MACD: an imaging marker for cardiovascular disease
Medical Imaging 2010: Computer-Aided Diagnosis
Registration-based interpolation applied to cardiac MRI
Medical Imaging 2010: Image Processing
Local Segmentation by Large Scale Hypothesis Testing: Segmentation as outlier detection
5th International Conference on Computer Vision Theory and Applications
Active illumination and appearance model for face alignment
Turkish Journal of Electrical Engineering and Computer Sciences
2009
Tetrahedral mesh improvement using multi-face retriangulation
Proceedings of the 18th international meshing roundtable
Spatial and Temporal Ray Diffenrentials
Department of Computer Science, University of Copenhagen
Three dimensional monocular human motion analysis in end-effector space
International Workshop on Energy Minimization Methods in Computer Vision and …
On the rate of structural change in scale spaces
International Conference on Scale Space and Variational Methods in Computer …
On Texture and Geometry in Image Analysis
A SVD Based Image Complexity Measure
International Conference on Computer Vision Theory and Applications (VISAPP …
Interactive Inverse Kinematics for Human Motion Estimation
Workshop on Virtual Reality Interaction and Physical Simulation VRIPHYS …
Planning and control of biped walking along curved paths on unknown and uneven terrain
International Conference on Intelligent Robotics and Applications
Lactic acid bacteria associated with a heat‐processed pork product and sources of variation affecting chemical indices of spoilage and sensory characteristics
Journal of Applied Microbiology
Maximal independent set graph partitions for representations of body-centered cubic lattices
The Visual Computer
Smoke simulation for fire engineering using a multigrid method on graphics hardware
6th Workshop on Virtual Reality Interactions and Physical Simulations
GPU Accelerated Tandem Traversal of Blocked Bounding Volume Hierarchy Collision Detection for Multibody Dynamics.
VRIPHYS
Interactive Inverse Kinematics for Human Motion Estimation.
VRIPHYS
A projected non-linear conjugate gradient method for interactive inverse kinematics
MATHMOD 2009-6th Vienna International Conference on Mathematical Modelling
Estimation of Joint types and Joint Limits from Motion capture data
Václav Skala-UNION Agency
Nonsmooth newton method for fischer function reformulation of contact force problems for interactive rigid body simulation
Workshop in Virtual Reality Interactions and Physical Simulation
BMD prediction of death is encapsulated by the Morphological Atherosclerosis Calcification Distribution (MACD) index
36th European Symposium on Calcified Tissues, Vienna, Austria 44, S265
Dense iterative contextual pixel classification using kriging
2009 IEEE Computer Society Conference on Computer Vision and Pattern …
Growth analysis of individual abdominal atherosclerotic calcified deposits
36th European Symposium on Calcified Tissues (ECTS)
Predictive Modelling of Cardiac 2D Multi-Slice MRI with Simultaneous Resolution of Cardiac and Respiratory Motion
CI2BM09-MICCAI Workshop on Cardiovascular Interventional Imaging and …
Shape and Deformation Analysis of the Human Ear Canal
Technical University of Denmark, DTU Informatics, Building
2008
Special issue on tribute workshop for Peter Johansen
Journal of Mathematical Imaging and Vision
Field of particle filters for image inpainting
Journal of Mathematical Imaging and Vision
Second order structure of scale-space measurements
Journal of Mathematical Imaging and Vision
Multi-Scale Natural Images: A database and some statistics
Proceedings of 16'th Danish Conference on Pattern Recognition and Image …
Tribute Workshop for Peter Johansen
Springer
A Non‐smooth Newton Method for Multibody Dynamics
AIP Conference Proceedings
Guessing tangents in normal flows
Journal of Mathematical Imaging and Vision
Volumetric Shells using Path Tracing
Signed distance fields using single-pass gpu scan conversion of tetrahedra
Gpu Gems
Automated Quantification of the Morphological Atherosclerotic Calcification Distribution on X-Rays Is a Strong Predictor of Mortality in Postmenopausal Women
Arteriosclerosis, Thrombosis, and Vascular Biology
Superior assessment of CVD death by MACD index compared with the framingham score is highly associated with predisposition to diabetes
Keystone Symposia, nr. S2
Morphological Atherosclerosis Calcification Distribution (MACD) Index is a Strong Predictor of Cardio-Vascular Death and Include Predictive Power of BMD
30th ASBMR Annual Meeting
Growth Pattern of Atherosclerotic Calcifications
Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2th …
Analysis of surfaces using constrained regression models
International Conference on Medical Image Computing and Computer-Assisted …
Estimation of shape model parameters for 3D surfaces
2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to …
Robust registration for change detection
Medical Imaging 2008: Image Processing
Non-rigid registration of 2D manifolds in 3D Euclidian space
Medical Imaging 2008: Image Processing
Robust registration for change detection [6914-101]
PROCEEDINGS-SPIE THE INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING 6914 (2 …
Non-rigid registration of 2D manifolds in 3D Euclidian space [6914-99]
PROCEEDINGS-SPIE THE INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING 6914 (2 …
2007
A curious robot: an explorative-exploitive inference algorithm
ROBOMAT
Proceedings of the 15th Scandinavian conference on Image analysis
Springer-Verlag
Image inpainting by cooling and heating
Scandinavian Conference on Image Analysis
Image Analysis: 15th Scandinavian Conference, SCIA 2007, Aalborg, Denmark, June 10-24, 2007, Proceedings
Springer Science & Business Media
Image Analysis: 15th Scandinavian Conference, SCIA 2007, Aalborg, Denmark, June 10-14, 2007 00
Springer-Verlag Berlin Heidelberg
Salient point and scale detection by minimum likelihood
JMLR: Workshop and Conference Proceedings: Gaussian Processes in Practice, 1 …
Generic maximum likely scale selection
1st International Conference on Scale Space and Variational Methods in …
Geometric and texture inpainting by Gibbs sampling
Swedish Symposium on Image Analysis (SSBA '07)
Photon differentials
Proceedings of the 5th international conference on Computer graphics and …
Line-stepping for shell meshes
Scandinavian Conference on Image Analysis
Boneless pose editing and animation
Scandinavian Conference on Image Analysis
Velocity-based shock propagation for multibody dynamics animation
ACM Transactions on Graphics (TOG) 26 (2), 12-es
Top Quark Physics Beyond The Standard Model
University of Karlsruhe, Germany
Analysis of deformation of the human ear and canal caused by mandibular movement
International Conference on Medical Image Computing and Computer-Assisted …
An active illumination and appearance (AIA) model for face alignment
2007 IEEE Conference on Computer Vision and Pattern Recognition
Texture enhanced appearance models
Computer Vision and Image Understanding
Evaluating a method for automated rigid registration
Medical Imaging 2007: Image Processing
Accelerated 3D image registration
Medical Imaging 2007: Image Processing
2006
AI for real-time strategy games
Master's thesis, IT-University of Copenhagen
Minimum Likelihood Image Feature and Scale Detection Based on the Brownian Image Model
Gaussian Processes in Practice Workshop
Tetrahedral Shell Tesselation and Methods for Surface Mesh Extrusion
SIMS 2004
Simulation Modelling Practice and Theory
Ballet balance strategies
Simulation Modelling Practice and Theory
Scan conversion of signed distance fields
Proceedings of DSAGM
A simple plane patcher algorithm
Department of Computer Science, University of Copenhagen
Automated 3D rigid registration of open 2D manifolds
MICCAI 2006 Workshop From Statistical Atlases to Personalized Models
2005
Detecting Interlaced or Progressive Source of Video
Multimedia Signal Processing, 2005 IEEE 7th Workshop on, 181 -
Maximum likely scale estimation
International Workshop on Deep Structure, Singularities, and Computer Vision …
A scale invariant covariance structure on jet space
International Workshop on Deep Structure, Singularities, and Computer Vision …
On α Kernels, Lévy Processes, and Natural Image Statistics
International Conference on Scale-Space Theories in Computer Vision
Area and volume restoration in elastically deformable solids
ELCVIA Electronic Letters on Computer Vision and Image Analysis
Physics-based Animation
Graphics Series
A multi-scale singularity bounding volume hierarchy
UNION Agency
The adaptive thin shell tetrahedral mesh
Václav Skala-UNION Agency
2004
Jet based feature classification
Proceedings of the 17th International Conference on Pattern Recognition …
Brownian images: A generic background model
Proceedings of Workshop on Statistical Learning in Computer Vision
Versatile Multibody Dynamics Animation
The Department of Computer Science, University of Conpenhagen
Stable, robust, and versatile multibody dynamics animation
Unpublished Ph. D. Thesis, University of Copenhagen, Copenhagen
Contact graphs in multibody dynamics simulation
DIKU
The thin shell tetrahedral mesh
Proceedings of DSAGM
Physics-based Animation and Simulation
DIKU H. Goldstein, CP Poole, and JL Safko (2002),[5]
Wedgelet enhanced appearance models
2004 Conference on Computer Vision and Pattern Recognition Workshop
2003
The nonlinear statistics of high-contrast patches in natural images
International Journal of Computer Vision
Generalized Context Learning
Proceedings of DSAGM'03
Properties of brownian image models in scale-space
International Conference on Scale-Space Theories in Computer Vision
Statistics of natural image geometry
Department of Computer Science
The Lagrange Formulation of The Deformable Object Model
Scripted bodies and spline-driven animation
Graphics programming methods
Collision detection of deformable volumetric meshes
Graphics programming methods
Some issues of biological shape modelling with applications
Scandinavian Conference on Image Analysis
Wedgelet Compression for Appearance Models
12th Danish Conference on Pattern Recognition and Image Analysis
2002
Toward a full probability model of edges in natural images
European Conference on Computer Vision
Sound interaction by use of comparative visual displays
Proceedings of the Second Danish HCI Symposium
B-splines
DIKU
Module based design for rigid body simulators
Department of Computer Science, University of Copenhagen
An Introduction to Approximating Heterogeneous Bounding Volume Hierarchies
University of Copenhagen, Department of Computer
Automated visual scoring of psoriasis
Informatics and Mathematical Modelling
2001
Technical Report DIKU-TR-00/3 Department of Computer Science University of Copenhagen Universitetsparken
Computing optic flow by scale-space integration of normal flow
Scale-Space and Morphology in Computer Vision
The complex statistics of high-contrast patches in natural images
WWW Proceedings of Second International IEEE Workshop on Statistical and …
En introducerende lærebog i dynamisk simulation af stive legemer
Maj